BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025E01LP1|AL428386
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1714 1710 0.0
>3x_Contig1714
Length = 18873
Score = 1710 bits (862), Expect = 0.0
Identities = 870/872 (99%), Gaps = 1/872 (0%)
Strand = Plus / Plus
Query: 1 gatcgggtattactgagcacaaaggtttggatggtgtacatgcaaataccgtggaagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2723 gatcgggtattactgagcacaaaggtttggatggtgtacatgcaaataccgtggaagcat 2782
Query: 61 tcgaccattcgaactataattccaacagtaatagcaacagtaacatgcaattcaaacagc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2783 tcgaccattcgaactataattccaacagtaatagcaacagtaaca-gcaattcaaacagc 2841
Query: 121 aagaatacggaaacttcaagctcaggaccaatcttcaatcacatcaattcctctacctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2842 aagaatacggaaacttcaagctcaggaccaatcttcaatcacatcaattcctctacctca 2901
Query: 181 ttgcattcaccacattctacaggttcaatgcaatctctgaatagctcacccagatagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2902 ttgcattcaccacattctacaggttcaatgcaatctctgaatagctcacccagatagcaa 2961
Query: 241 cgatggtacaaaagaccacattctacaccctaaattaaatatgctattaaatagcatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2962 cgatggtacaaaagaccacattctacaccctaaattaaatatgctattaaatagcatgag 3021
Query: 301 ttattctatcacctctaatttccagactgactgaagaacagaattgaacactcgtaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3022 ttattctatcacctctaatttccagactgactgaagaacagaattgaacactcgtaaaat 3081
Query: 361 catgggtaaaacataataggtagacacattatggactttctagtaatcaaaccttattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3082 catgggtaaaacataataggtagacacattatggactttctagtaatcaaaccttattca 3141
Query: 421 ttgtgctttctttgtcccagaatgcgcgttactgccgtatagtatgcattgcatcgagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3142 ttgtgctttctttgtcccagaatgcgcgttactgccgtatagtatgcattgcatcgagat 3201
Query: 481 gatctcatcactgttaccctgatatccgatggaaaacggtgacatcaccgtcggaggtat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3202 gatctcatcactgttaccctgatatccgatggaaaacggtgacatcaccgtcggaggtat 3261
Query: 541 tggaagccctaacgagtcattatcaagtcacatcaaacgaacagtggtgtacggattcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3262 tggaagccctaacgagtcattatcaagtcacatcaaacgaacagtggtgtacggattcta 3321
Query: 601 tgtccataatgtttttctgcatgtctgtwatttttgggaaacatttatcgatttgtctac 660
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3322 tgtccataatgtttttctgcatgtctgtaatttttgggaaacatttatcgatttgtctac 3381
Query: 661 aaatgtccatcgaaaagaaacaattccatctaaaaaattttccgcggtttgccaaactca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3382 aaatgtccatcgaaaagaaacaattccatctaaaaaattttccgcggtttgccaaactca 3441
Query: 721 tctcatcgcatctagagatcctacagccaaacaaccgagagaaaattttttttcttcacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3442 tctcatcgcatctagagatcctacagccaaacaaccgagagaaaattttttttcttcacc 3501
Query: 781 tagccgcccatcaagagtgattttgtatataaggaggggtacgaatcccattgaattgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3502 tagccgcccatcaagagtgattttgtatataaggaggggtacgaatcccattgaattgtt 3561
Query: 841 atatcgttttccttttaatgatacttctgaag 872
||||||||||||||||||||||||||||||||
Sbjct: 3562 atatcgttttccttttaatgatacttctgaag 3593
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7360
Number of Sequences: 1807
Number of extensions: 7360
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 1
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)